PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY86178.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

M-type_MADS

Protein Properties

Length: 193aa MW: 21712.6 Da PI: 8.4512

Description

M-type_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY86178.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	48.1	1.5e-15	19	56	2	39
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEE CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevavii 39 +ienks qv f+kRr ++ KA ELS+LC+aeva+++ TEY86178.1 19 KIENKSSLQVAFTKRRGRLFRKATELSILCGAEVAILL 56 69*********************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 193 aa Download sequence
MENSNGTKTP GRRKIPMRKI ENKSSLQVAF TKRRGRLFRK ATELSILCGA EVAILLLQLI 60 FVGIAVSYGL LSKNNDIEPH KDNYKIDNAQ LYLSKLLQVS SVFDDESESE SVIEENKFEA 120 LNSQYHRDET VVVVEEQNDA VSQSSRKPLL LPVRSLNHPL PNPNSRAGEA EEEKEVLRSP 180 IPWRSRPGRS GDG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60440.1	1e-14	M-type_MADS family protein