PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY86281.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family C3H
Protein Properties Length: 318aa    MW: 35920.5 Da    PI: 7.0154
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY86281.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH23.41e-07120140526
                 --SGGGGTS--TTTTT-SS-SS CS
     zf-CCCH   5 lCrffartGtCkyGdrCkFaHg 26 
                  C+ f++ GtC+ Gd C F+Hg
  TEY86281.1 120 ACPEFRK-GTCRKGDACEFSHG 140
                 7******.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 318 aa     Download sequence    
MMVGERSFGH TPPWADDPTT AINAIDDYSL FFQTDSLKAL QRYLPSNSND VVPELPYADS  60
EGSDFVPVDA HTCDNFRMFE FKVRKCARGR SHDWTECPFA HPGEKARRRD PRKHHYSGTA  120
CPEFRKGTCR KGDACEFSHG VFECWLHPAR YRTQPCKDGM NCKRRVCFFA HAPEQLRVLS  180
PRADSSSPHG RFAFIASPES VSPPMTESPP MSPTVSEMVA SLRQLQLSKV NSMPSSWLGG  240
CPSPRMVPPG YFSVPTTPTR AVARPGLAWE SEEEPMERVE SGRRLRDKMF EKLSKENPLD  300
RVEPDPNPDV DWVADLIN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G19810.12e-99C3H family protein