PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY86761.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family M-type_MADS
Protein Properties Length: 192aa    MW: 20383.6 Da    PI: 9.0601
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY86761.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF44.32.3e-14153192241
                 ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE- CS
      SRF-TF   2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifs 41 
                 +ienks  qv  +kRr g++ KA  LS+LC+aeva+++ s
  TEY86761.1 153 KIENKSSLQVACTKRRGGLFRKATKLSILCGAEVAILVQS 192
                 69**********************************9965 PP
Sequence ? help Back to Top
Protein Sequence    Length: 192 aa     Download sequence    
MESLVALRKS PPRRLVQATC RLDLFSIFLI GIFLLPRVLC CWNSPFLLEA AVAYKIVHHE  60
GEEGPDDRGN LSSLVLLMIE GLGGGGGDNG FAAGVVVDGG SGEGAGGDLA GGGGSDNVHD  120
PILYFHIATV ASSKNGEFQR HKTLGRRKIP MRKIENKSSL QVACTKRRGG LFRKATKLSI  180
LCGAEVAILV QS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60440.19e-14M-type_MADS family protein