PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY86811.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family RAV
Protein Properties Length: 327aa    MW: 36635.2 Da    PI: 9.7829
Description RAV family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY86811.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP243.58e-1453101155
         AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 s++kGV   + +grW A+I++      ++r++lg+f  +eeAa+a++ a+++++g
  TEY86811.1  53 SRFKGVVPQP-NGRWGAQIYEK-----HQRVWLGTFNEEEEAARAYDTAAQRFRG 101
                 689***9788.8*********3.....5*************************98 PP
2B3992.9e-31175272194
                 EEEE-..-HHHHTT-EE--HHH.HTT....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeeh....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 
                 f+k+ tpsdv+k++rlv+pk++ae+h    +g++ +++ l +ed+ g +W+++++y+++s++yvltkGW++Fvk+++L++gD+v F +++  +++l++
  TEY86811.1 175 FEKAVTPSDVGKLNRLVIPKQHAEKHfplqSGNSSKGVLLNFEDSGGSVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLRAGDIVSFGRSNCPDRQLYI 272
                 89****************************888899**************************************************965436665555 PP
Sequence ? help Back to Top
Protein Sequence    Length: 327 aa     Download sequence    
MDVSSIDEST TSESISITPP AAEKLCRVGS GASVIIDAAE SGVEAESRKL PSSRFKGVVP  60
QPNGRWGAQI YEKHQRVWLG TFNEEEEAAR AYDTAAQRFR GRDAVTNFKP LSERSHDDGG  120
VEAAFLNSHS KAEIVDMLRK HTYGDELEQS RRHLGDRRGR GPSCSRPDKA PEQLFEKAVT  180
PSDVGKLNRL VIPKQHAEKH FPLQSGNSSK GVLLNFEDSG GSVWRFRYSY WNSSQSYVLT  240
KGWSRFVKEK NLRAGDIVSF GRSNCPDRQL YIDFKARNKP AIVRLFGVNI SEVPRNGDER  300
CGGKRMMEME IFGLKNANKK QRIIDAL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G25560.11e-137RAV family protein