PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY86862.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

MIKC_MADS

Protein Properties

Length: 231aa MW: 26346.1 Da PI: 9.6952

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY86862.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	95.9	1.7e-30	9	59	1	51
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krienk+nrqvtf+kRrng+lKKA+ELS+LCdae a+iifss+gklye++s TEY86862.1 9 KRIENKINRQVTFAKRRNGLLKKAYELSILCDAELALIIFSSKGKLYEFCS 59 79***********************************************96 PP
2	K-box	85.8	9e-29	85	172	12	99
K-box 12 akaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 ++ s++ e kLk+++e Lq++qRhllGedL++ ++eL qLe L+ sl++iRsk++++++eq++ lq+kek+l ++n+aLrkkle TEY86862.1 85 DDERSSYLECLKLKSRVEVLQQSQRHLLGEDLGKFGVRELDQLECVLDASLNRIRSKQTQHMFEQLSGLQRKEKDLMDINRALRKKLE 172 45678899******************************************************************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 231 aa Download sequence
MGRGKVELKR IENKINRQVT FAKRRNGLLK KAYELSILCD AELALIIFSS KGKLYEFCSS 60 SSMAKTLERY HKSSYGLIES QQSPDDERSS YLECLKLKSR VEVLQQSQRH LLGEDLGKFG 120 VRELDQLECV LDASLNRIRS KQTQHMFEQL SGLQRKEKDL MDINRALRKK LEGGSDQPVP 180 YRPQPAARPQ VFFEPLAAND STLIRYNSQV GQNNAEGSSQ NVNAILPAWM H

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G02310.1	3e-81	MIKC_MADS family protein