PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY87161.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family GRAS
Protein Properties Length: 537aa    MW: 59002 Da    PI: 7.3135
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY87161.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS349.74.5e-1071715372374
        GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNq 100
                 ++ L+++A a+s+g+l++a+++++rl++la+p+g++ qRl+++++ AL++r++            + tse  s+e+  ++++++evsP++k+s+++aN 
  TEY87161.1 171 KQSLIDAAAAISEGNLAAATEIITRLQQLANPNGSSEQRLTSFMVSALKSRVNP-----------TGTSELYSKEHKLSTQMLYEVSPCFKLSFMAANL 258
                 578**************************************************9...........223333378888999******************* PP

        GRAS 101 aIleavege..ervHiiDfdisqGlQWpaLlqaLasRp...egppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeL 194
                 aIl+a++++  +r+H++Df+i++G+Q++ +l+aLa+ +   + +  l+iT++++++sg  e+l+ +ge L+ +A ++gv+f+f+v     ++d++  +L
  TEY87161.1 259 AILNATSEQgfQRIHVVDFEIGEGGQYMHFLHALAANQsggKRASALKITAFSDNTSGGDEKLKIVGESLHTLAYKIGVRFDFSV-KKLIVSDFNRIKL 356
                 ******99988************************87755444679**************************************9.78899******** PP

        GRAS 195 rvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgre 293
                  ++pgEalaVnl+++lh+l+desv++e+ rde+L+lvk+lsP+v +vve e++ n++++  r+ ea+e+y al+dsl+a+++r + +r+ +E++ +gr+
  TEY87161.1 357 GIEPGEALAVNLAFKLHNLPDESVTTENLRDELLRLVKGLSPDVTTVVEPEMNANTAPLTVRVREACEFYGALLDSLDATVSRGNPDRVRIEEA-VGRK 454
                 **********************************************************************************************.**** PP

        GRAS 294 ivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk..sdgyrveeesgslvlgWkdrpLvsvSaWr 374
                 ivn vaceg+er+er+e ++kWr+r+++aGF++vp+s+ +a++ ++ l+     + g++v e+sg +++gW++r+L+++SaWr
  TEY87161.1 455 IVNSVACEGRERVERCEVFGKWRARMGMAGFESVPMSQPVADTLRARLNSGTrgNPGFTVTEKSGGICFGWMGRTLTVASAWR 537
                 ********************************************9999876556899*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 537 aa     Download sequence    
MSSGFPGGFT NQQQQFPFRS PLSEILHDPA SQIRQRKRSL AEFQQQNQQG LELYLRNVKL  60
RPNFQHANPL SPIFPVDFPT VCLQPYRNAE VLGHETRNNK MMMNHRLQEL EKELLGDEVD  120
GDEVSVVTHS DWSEAIQNLI APTKMPISPS PTSSSSSCSS TSASPPILTT KQSLIDAAAA  180
ISEGNLAAAT EIITRLQQLA NPNGSSEQRL TSFMVSALKS RVNPTGTSEL YSKEHKLSTQ  240
MLYEVSPCFK LSFMAANLAI LNATSEQGFQ RIHVVDFEIG EGGQYMHFLH ALAANQSGGK  300
RASALKITAF SDNTSGGDEK LKIVGESLHT LAYKIGVRFD FSVKKLIVSD FNRIKLGIEP  360
GEALAVNLAF KLHNLPDESV TTENLRDELL RLVKGLSPDV TTVVEPEMNA NTAPLTVRVR  420
EACEFYGALL DSLDATVSRG NPDRVRIEEA VGRKIVNSVA CEGRERVERC EVFGKWRARM  480
GMAGFESVPM SQPVADTLRA RLNSGTRGNP GFTVTEKSGG ICFGWMGRTL TVASAWR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52510.11e-131GRAS family protein