PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY87288.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family NF-YC
Protein Properties Length: 136aa    MW: 15225.5 Da    PI: 10.2311
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY87288.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC40.84.9e-13221002097
       NF-YC  20 elPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtd.ifdflvdivp 97 
                 e+P  r+k+i+k d+d++++ aea  l++ + +lf+  l+ +s   a e+kr+t+    i  a++r   + dfl+d  p
  TEY87288.1  22 EIPTRRVKNIMKLDKDISKVNAEALFLVASSTQLFLQFLAEKSAHAAVEKKRKTITLELIRIATKRHRpTADFLLDSLP 100
                 7899*********************************************************9999875389*****987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 136 aa     Download sequence    
MAEQEEGENA AGIDEPPPPK LEIPTRRVKN IMKLDKDISK VNAEALFLVA SSTQLFLQFL  60
AEKSAHAAVE KKRKTITLEL IRIATKRHRP TADFLLDSLP LPAEQNHPGD RAKSRPDKKP  120
VPFATRSIDA FFQKTT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43250.11e-40NF-YC family protein