PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY87298.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

SBP

Protein Properties

Length: 478aa MW: 52350.5 Da PI: 7.416

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY87298.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	127.3	6e-40	175	252	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +C vegC++dls+ keyhr+h+vC+ hskap+v+v gle+rfCqqCsrfh++sefDe+krsCrrrL++hn+rrrk+q+ TEY87298.1 175 RCVVEGCNSDLSTGKEYHRKHRVCDSHSKAPKVVVGGLERRFCQQCSRFHNISEFDEKKRSCRRRLSDHNARRRKPQQ 252 6**************************************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 478 aa Download sequence
MSHYLEMDWN TKWDWESYDA FGPKTTENPK KLQLVDWTII DDREIDAGSF NLSAGASGSD 60 GGHVSSAKSS ISASDSSTKN GQTPPDVRLM AYEDFSGNFK ITEREGTKIS GTSPPLEASI 120 GSVEPLIGLK LGKRTYFENS GAGGHVKGAS STGPTASTSS LKKTKLQGDN LPMPRCVVEG 180 CNSDLSTGKE YHRKHRVCDS HSKAPKVVVG GLERRFCQQC SRFHNISEFD EKKRSCRRRL 240 SDHNARRRKP QQEIQYNSRL SSPFHGGRQQ MSFMMSNSSL VHSRAMGDTA WDSTKFTLTK 300 GYHPLKSSGD GVSSEQMHIP GAKLTHFTNM QSCAAKVFPT SKSSVADVSN PGVFQLKSPS 360 AVALLEIGYC LEGSKYSPHL DAAPEYGRAL SLLSSNSWAP CGSESMALNQ IQENETCVSQ 420 PLPTMHGIPE GVPLSSSELW LHQPPSAHTP LPDNTNFPEI QLFITPYEET DLYSNIMN

Sequence ? help Back to Top

Protein Sequence Length: 478 aa Download sequence

MSHYLEMDWN TKWDWESYDA FGPKTTENPK KLQLVDWTII DDREIDAGSF NLSAGASGSD  60
GGHVSSAKSS ISASDSSTKN GQTPPDVRLM AYEDFSGNFK ITEREGTKIS GTSPPLEASI  120
GSVEPLIGLK LGKRTYFENS GAGGHVKGAS STGPTASTSS LKKTKLQGDN LPMPRCVVEG  180
CNSDLSTGKE YHRKHRVCDS HSKAPKVVVG GLERRFCQQC SRFHNISEFD EKKRSCRRRL  240
SDHNARRRKP QQEIQYNSRL SSPFHGGRQQ MSFMMSNSSL VHSRAMGDTA WDSTKFTLTK  300
GYHPLKSSGD GVSSEQMHIP GAKLTHFTNM QSCAAKVFPT SKSSVADVSN PGVFQLKSPS  360
AVALLEIGYC LEGSKYSPHL DAAPEYGRAL SLLSSNSWAP CGSESMALNQ IQENETCVSQ  420
PLPTMHGIPE GVPLSSSELW LHQPPSAHTP LPDNTNFPEI QLFITPYEET DLYSNIMN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	232	249	KKRSCRRRLSDHNARRRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G43270.1	4e-61	SBP family protein