PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY87304.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

TCP

Protein Properties

Length: 213aa MW: 22832.7 Da PI: 9.2212

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY87304.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	118.6	7.5e-37	29	113	2	85
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasns 85 a+k+++++++h kv+gR+RR+R++a+caar+F+L++eLG+++d++ti+WLlqqa+p+i ++tgt++++as+ a+ss+s++++s TEY87304.1 29 APKRTSNKDRHKKVEGRGRRIRIPALCAARIFQLTRELGHKTDGETIQWLLQQAEPSIVAATGTGTIPASALaGAGSSVSEQGSS 113 789******************************************************************8886555555555533 PP

Sequence ? help Back to Top
Protein Sequence Length: 213 aa Download sequence
MEHKPSNPNP QPNMALAIID DDAKKKQLAP KRTSNKDRHK KVEGRGRRIR IPALCAARIF 60 QLTRELGHKT DGETIQWLLQ QAEPSIVAAT GTGTIPASAL AGAGSSVSEQ GSSVYSRLVE 120 SGMGIRASSI SMMNEGIWPS FNGFGSAIFQ NANIQSANRG VKLGFEFPVP GLELGLSQEG 180 QMGLNLQAFS HFYQHIGDCS GGDQNQGKEN SQG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G27010.1	2e-50	TCP family protein