PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY87619.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family LBD
Protein Properties Length: 236aa    MW: 25361 Da    PI: 7.6788
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY87619.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF26084.71.3e-264108199
      DUF260   1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeer.edamsslvyeAearardPvyGavgvilklqqqleqlkae 93 
                 +C++C+vlr++C++ C+l+p++     p++q++++ +++k++G++ +l+ll+a+p+  r  ++++sl+yeA+ r+ +P++G+vg+++++++  +++++e
  TEY87619.1   4 SCNGCRVLRKGCSEYCTLRPCLhwlnsPQSQSNATLFLAKFYGRAGLLNLLAAAPPLSRpAEIFKSLLYEACGRIINPIHGSVGLMSSGEWPRCHAAVE 102
                 6*****************************************************999974789********************************9999 PP

      DUF260  94 lallke 99 
                 ++l ++
  TEY87619.1 103 AVLGGA 108
                 887655 PP
Sequence ? help Back to Top
Protein Sequence    Length: 236 aa     Download sequence    
MGLSCNGCRV LRKGCSEYCT LRPCLHWLNS PQSQSNATLF LAKFYGRAGL LNLLAAAPPL  60
SRPAEIFKSL LYEACGRIIN PIHGSVGLMS SGEWPRCHAA VEAVLGGAQL ISPLHGCDIR  120
HVSKGSAPRA GSRCHRRRSA SLADSATAAQ CVSEAEAKFT ITGWDDSKEL VIGEKFRRGP  180
SHDSFSVETV DPSLLLFNKG TIPETGLSEV GLELSLGMNP LLQTYFTTVI DISDSE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68510.12e-44LBD family protein