PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY87645.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

TCP

Protein Properties

Length: 305aa MW: 34188.5 Da PI: 8.0652

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY87645.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	143.4	1.8e-44	86	215	2	133
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec..eaesssssasnsssgkaaksaaksk 98 agkkdrhski+T++g RdRR+Rls+++a++fFdLqd+LG+dk+sktieWL++q+++aikel + + +++ ++s+++s+s + + +s ++ TEY87645.1 86 AGKKDRHSKICTAQGIRDRRMRLSLQVARKFFDLQDMLGYDKASKTIEWLFTQSNKAIKELHSPPPPPPPPLllPNNSDVKSES----ECEDQSGIEEI 180 89************************************************************77777555643333333333....11122222444 PP TCP 99 ksqksaasalnlakesrakarararertrekmrik 133 +s++ a ++ + ak sr+kar+rar rtrekm k TEY87645.1 181 NSNAVAPTTADRAKASREKARERARCRTREKMLVK 215 55555555599999****************876 PP

Sequence ? help Back to Top
Protein Sequence Length: 305 aa Download sequence
MFPSPNCNNS LLKTRPSLSS PSPSSFPFDQ NPNLKHDNIL FNFPSPFLDE NESPLDQIFY 60 QSHLAEKLKT DHDQIPTPPP PRRRKAGKKD RHSKICTAQG IRDRRMRLSL QVARKFFDLQ 120 DMLGYDKASK TIEWLFTQSN KAIKELHSPP PPPPPPLLLP NNSDVKSESE CEDQSGIEEI 180 NSNAVAPTTA DRAKASREKA RERARCRTRE KMLVKRLRLC GNPNPFEGGD EGLNSEIRVS 240 QPDVGMIDKF LGNSEYHCAV SDPSLVGYIG NWDVLSNCFH YSVGNLVSTA GNLNSLFSSP 300 TPEFP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	81	85	PRRRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68800.1	7e-29	TCP family protein