PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY87687.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family MIKC_MADS
Protein Properties Length: 253aa    MW: 29364.5 Da    PI: 9.0269
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY87687.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF98.33.1e-31959151
                S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
      SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                krienk+nrqvtfskRr+g+lKKA+E+SvLCdaeva+i+fs++gkl+eys+
  TEY87687.1  9 KRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALIVFSHKGKLFEYST 59
                79***********************************************96 PP
2K-box109.53.8e-36871751199
       K-box  11 eakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 
                  +   +++ e++kLk++ie Lqr++Rh++GedL+++s+k+Lq+LeqqL+++lk+iRs+Kn+ll+++i+elq+kek++qeen +L kk++
  TEY87687.1  87 PESPVNWTLEHSKLKARIELLQRNHRHYMGEDLDTMSMKDLQNLEQQLDSALKTIRSRKNQLLFDSISELQRKEKAIQEENSMLAKKIK 175
                 455679*********************************************************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 253 aa     Download sequence    
MGRGKVQLKR IENKINRQVT FSKRRAGLLK KAHEISVLCD AEVALIVFSH KGKLFEYSTD  60
SWFSMDRILE KYERYSFAER QLIANEPESP VNWTLEHSKL KARIELLQRN HRHYMGEDLD  120
TMSMKDLQNL EQQLDSALKT IRSRKNQLLF DSISELQRKE KAIQEENSML AKKIKYKEKE  180
LGQQTQWEQR NSTTNTAALP PLPPPQPQYL MASRLPSLNM GGGTYDEESE ARRNELDLTL  240
DSLYSCHLGC FAA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69120.11e-110MIKC_MADS family protein