PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY87690.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

YABBY

Protein Properties

Length: 194aa MW: 22014.2 Da PI: 10.2852

Description

YABBY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY87690.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	YABBY	110.8	2.4e-34	52	178	20	163
YABBY 20 tilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsvsseklsenedeevprvppvirP 118 i v +P + ++ ++tv+CGhC++l ++ + +sq +h ++ + +++ +k +sas+s s++++ ++p++p v++P TEY87690.1 52 IICQVGIPCKRMLDTLTVKCGHCSNLSFLSTKPQSQGHC-YDH-----------QTSLHYQAFCNEFKKGQSASSSS-----STSSEPSSPKAPFVVKP 133 57889*****************986544444333222.222...........33445555544444444333333.....346678899999* PP YABBY 119 PekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahf 163 Pek+ r Psaynrf+keeiqrika+nP+i hreafsaaaknWa + TEY87690.1 134 PEKKHRLPSAYNRFMKEEIQRIKAANPEIPHREAFSAAAKNWARY 178 *****************************************76 PP

Sequence ? help Back to Top
Protein Sequence Length: 194 aa Download sequence
MLIHFLFPFL FISHPTISHY TFNIHHHGFG STCLRARLLR PLHLLQHRSR DIICQVGIPC 60 KRMLDTLTVK CGHCSNLSFL STKPQSQGHC YDHQTSLHYQ AFCNEFKKGQ SASSSSSTSS 120 EPSSPKAPFV VKPPEKKHRL PSAYNRFMKE EIQRIKAANP EIPHREAFSA AAKNWARYIP 180 NTPQMNASTS TNKA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69180.1	5e-52	YABBY family protein