PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY87702.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family M-type_MADS
Protein Properties Length: 227aa    MW: 25761.7 Da    PI: 9.4681
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY87702.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF80.79.9e-26959151
                S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
      SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                krie+ks rqvtfskRrng++KKA+ELSvLCd ++a ii+s +gk y ++s
  TEY87702.1  9 KRIEDKSSRQVTFSKRRNGLFKKAKELSVLCDLDIAAIIYSCRGKPYHFCS 59
                79*********************************************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 227 aa     Download sequence    
MGRRKLEIKR IEDKSSRQVT FSKRRNGLFK KAKELSVLCD LDIAAIIYSC RGKPYHFCST  60
NSLTEIVQRY HNRAETEAGC SSQVGESQLL ALPSLEVWPS RRLNIQNTRV SSIVKSFFKL  120
WKGRQELDKP CVDDLSVTDF VHLEEQFETA LLQTRATKPI VPTMSRQLSF AYGTNLLLES  180
LSSLQGKEKL LEEENKMLQE KICASKTKTA KKTLAFDLNA LPGGETE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65050.29e-31MIKC_MADS family protein