PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY87847.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

C2H2

Protein Properties

Length: 362aa MW: 39761 Da PI: 8.2574

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY87847.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	15.8	4e-05	25	47	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y C+ C+k F r nL+ H r H TEY87847.1 25 YICEVCHKGFQRDQNLQLHRRGH 47 89*******************88 PP
2	zf-C2H2	13.6	0.0002	101	123	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C+k++ +s+ k H + + TEY87847.1 101 WKCDKCSKRYAVQSDWKAHAKIC 123 58*****************9987 PP
3	zf-C2H2	11.4	0.00096	131	149	5	23
TTTEEESSHHHHHHHHHHT CS zf-C2H2 5 dCgksFsrksnLkrHirtH 23 dCg+ Fsrk+++++H + TEY87847.1 131 DCGTIFSRKDSFVTHRAFC 149 8**************8765 PP

Sequence ? help Back to Top
Protein Sequence Length: 362 aa Download sequence
MFFFVDPDAE VVALSPRTLM ATNRYICEVC HKGFQRDQNL QLHRRGHNLP WKLKQRPATQ 60 AKKRVYVCPE PNCVHHNPAR ALGDLTGIKK HYCRKHGDKK WKCDKCSKRY AVQSDWKAHA 120 KICGTREYRC DCGTIFSRKD SFVTHRAFCD ALNEENYMAK HNAGEAMVQN HAEEVMSASA 180 DLSCHEPLSL STHGMMMAGS FNPFYSPRTL KAAAIGGLSS PPLAANSSYT SATALLQRAA 240 QMGSKTSDGT SLSPTLLRGF TGYLTQTRNI ADKGSSEAGF NAAAPLISTA SSGMLRGDVA 300 EMGLYDLSVF MGSSGGGHST GLVLQEQEKM TVDFLGVAPP TFSGATEYED ERQCLEDVHS 360 QW

Sequence ? help Back to Top

Protein Sequence Length: 362 aa Download sequence

MFFFVDPDAE VVALSPRTLM ATNRYICEVC HKGFQRDQNL QLHRRGHNLP WKLKQRPATQ  60
AKKRVYVCPE PNCVHHNPAR ALGDLTGIKK HYCRKHGDKK WKCDKCSKRY AVQSDWKAHA  120
KICGTREYRC DCGTIFSRKD SFVTHRAFCD ALNEENYMAK HNAGEAMVQN HAEEVMSASA  180
DLSCHEPLSL STHGMMMAGS FNPFYSPRTL KAAAIGGLSS PPLAANSSYT SATALLQRAA  240
QMGSKTSDGT SLSPTLLRGF TGYLTQTRNI ADKGSSEAGF NAAAPLISTA SSGMLRGDVA  300
EMGLYDLSVF MGSSGGGHST GLVLQEQEKM TVDFLGVAPP TFSGATEYED ERQCLEDVHS  360
QW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G02670.1	1e-102	C2H2 family protein