PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY87875.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

CO-like

Protein Properties

Length: 408aa MW: 44911.6 Da PI: 7.1313

Description

CO-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY87875.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	21.3	5.7e-07	4	41	6	37
zf-B_box 6 CpeHeekelqlfCedCqqllCedClleeHkg......H 37 C+ +++ +++l+C+ ++ lC +C ++ H+ H TEY87875.1 4 CDFCGSRQAILYCRADSAKLCLSCDQQVHSAnslskkH 41 ****99*******************654455555 PP
2	zf-B_box	28.1	4.2e-09	44	89	3	42
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg.......Htvvpl 42 ++C+++ +++++ C +++ lC+dC H g H+++p+ TEY87875.1 44 SQICDNCAAEPASFRCSTDGLVLCQDCDWDAH-GirlvsaaHDRCPV 89 579*************************9999.76888888988875 PP
3	CCT	64.2	4e-22	361	404	1	44
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44 R +a++RYkeK+ktR+++K+irYesRKa+A++R+RvKGrFvk+ TEY87875.1 361 RGNAMQRYKEKKKTRRYDKHIRYESRKARADTRKRVKGRFVKAH 404 7789*************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 408 aa Download sequence
MVWCDFCGSR QAILYCRADS AKLCLSCDQQ VHSANSLSKK HLRSQICDNC AAEPASFRCS 60 TDGLVLCQDC DWDAHGIRLV SAAHDRCPVD SFSGCPSALE LAAAWGLEIE KPYEWGGLLD 120 DLMVPNARSM IYSDCGGELV SNKKKSSSCG KQKQLILKQL IELLADGGGD GEDVRPGTPR 180 YEPEQQQQEL PQDRGGFTSL LMMPTPVDHK DHRNNTTACD HGAQIWDFNL GQLRSREESS 240 PVELEFGGND MFTMKSYGEL LKEPSLAKRR GVDVSGVNCS VAQEDIIPFN SAANNQTPSQ 300 GPATSESNNV PVSRPPCSGL TKPESSGGSK DLQFTNQSIL LASESVAAMS KSDIELLAMN 360 RGNAMQRYKE KKKTRRYDKH IRYESRKARA DTRKRVKGRF VKAHEAPV

Sequence ? help Back to Top

Protein Sequence Length: 408 aa Download sequence

MVWCDFCGSR QAILYCRADS AKLCLSCDQQ VHSANSLSKK HLRSQICDNC AAEPASFRCS  60
TDGLVLCQDC DWDAHGIRLV SAAHDRCPVD SFSGCPSALE LAAAWGLEIE KPYEWGGLLD  120
DLMVPNARSM IYSDCGGELV SNKKKSSSCG KQKQLILKQL IELLADGGGD GEDVRPGTPR  180
YEPEQQQQEL PQDRGGFTSL LMMPTPVDHK DHRNNTTACD HGAQIWDFNL GQLRSREESS  240
PVELEFGGND MFTMKSYGEL LKEPSLAKRR GVDVSGVNCS VAQEDIIPFN SAANNQTPSQ  300
GPATSESNNV PVSRPPCSGL TKPESSGGSK DLQFTNQSIL LASESVAAMS KSDIELLAMN  360
RGNAMQRYKE KKKTRRYDKH IRYESRKARA DTRKRVKGRF VKAHEAPV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28050.1	1e-50	CO-like family protein