PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY87887.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family SBP
Protein Properties Length: 183aa    MW: 20222.7 Da    PI: 6.8394
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY87887.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP66.26.7e-211763248
                -SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSS CS
         SBP  2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsr 48
                C v++C+adl  ++eyhrrhkvCe+hsk+p v++ g+eqrfCqqCs 
  TEY87887.1 17 CLVDRCSADLRLCREYHRRHKVCEAHSKTPRVTIGGREQRFCQQCSS 63
                *********************************************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 183 aa     Download sequence    
MESSSKRSKA PASVAHCLVD RCSADLRLCR EYHRRHKVCE AHSKTPRVTI GGREQRFCQQ  60
CSSSSTRMEE RLVSFSREPQ IVAGVMGYPW SGVDVNDGNE IGEGALQQQQ LSYLDTAAAA  120
AHQLESSSSS AFVSPNMMME CDGALPLLSF PPPAIAIDYH QTTLHFPHHN VGSSHQTLSF  180
MWD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G50670.12e-19SBP family protein