PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY87888.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

MIKC_MADS

Protein Properties

Length: 242aa MW: 27620.3 Da PI: 8.8419

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY87888.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	99.8	1e-31	9	59	1	51
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krienk+nrqvtf+kRrng+lKKA+ELSvLCdaeva+iifs++gklye++s TEY87888.1 9 KRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCS 59 79***********************************************96 PP
2	K-box	90.6	2.9e-30	85	175	10	100
K-box 10 eeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 ea + s+qqe+ kLk+++e Lqr+qR+llGe+L++L+ keL++Le+qL+ slk+iRs++++ +l+ +++lq+ke++l+e+nk+L+++l+e TEY87888.1 85 REALELSSQQEYLKLKARYEALQRTQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQAMLDTLQDLQNKEHALNEANKSLKQRLME 175 45556689*******************************************************************************9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 242 aa Download sequence
MGRGRVELKR IENKINRQVT FAKRRNGLLK KAYELSVLCD AEVALIIFSN RGKLYEFCSS 60 SSMLKTLERY QKCNYGAPDT SVSTREALEL SSQQEYLKLK ARYEALQRTQ RNLLGEELGP 120 LNSKELESLE RQLDMSLKQI RSTRTQAMLD TLQDLQNKEH ALNEANKSLK QRLMEGNQMT 180 LTWNQNAQDV GYGRQPQHQP QADGFFHPLE CEPTLQIGYH TDPITGAAAG HSVNNYISGW 240 LP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G24260.1	1e-125	MIKC_MADS family protein