PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY87890.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

SBP

Protein Properties

Length: 477aa MW: 52137.4 Da PI: 7.8085

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY87890.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	128.6	2.3e-40	175	252	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +C vegC++dls+akeyhr+h+vC+ hskap+v+v gle+rfCqqCsrfh++sefDe+krsCrrrL++hn+rrrk+q+ TEY87890.1 175 RCVVEGCNSDLSTAKEYHRKHRVCDSHSKAPKVVVGGLERRFCQQCSRFHNISEFDEKKRSCRRRLSDHNARRRKPQQ 252 6**************************************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 477 aa Download sequence
MSHYLEMDWN TKWDWESYDA FGPKTTENPK KLQLVDLTII DDREIDAGSF NLSAGASGSD 60 GGHVSSAKSS ISASDSSTKD GQTPPDFRLM AYEDISGNFK ITEREGTKIS GTSPPLEASI 120 GSVEPLIGLK LGKRTYFENS GAGGHVKSAP SAGPTASTAS LKKTKLLGDN LPMPRCVVEG 180 CNSDLSTAKE YHRKHRVCDS HSKAPKVVVG GLERRFCQQC SRFHNISEFD EKKRSCRRRL 240 SDHNARRRKP QQEIQYNSRL SSPFYGGRQQ MSFMMSNPSL VHSRAMGDTA WDSTKFTLTK 300 GYHPLKSSGD GVSREQMHIP GAKLTHFTNM QSSAAKGIPT SKSSVADVSN PGVFQLKSPS 360 AALPEKGYCL EGSKYSPHLD AAPEYGRALS LLSSNSWAPC GSESMALNQI QENEICVSQP 420 LPTMHGIPEG VPLSSSELWL HQLPSAHPPL PGNTNFPEIQ LFITPYEETD LYSSIMN

Sequence ? help Back to Top

Protein Sequence Length: 477 aa Download sequence

MSHYLEMDWN TKWDWESYDA FGPKTTENPK KLQLVDLTII DDREIDAGSF NLSAGASGSD  60
GGHVSSAKSS ISASDSSTKD GQTPPDFRLM AYEDISGNFK ITEREGTKIS GTSPPLEASI  120
GSVEPLIGLK LGKRTYFENS GAGGHVKSAP SAGPTASTAS LKKTKLLGDN LPMPRCVVEG  180
CNSDLSTAKE YHRKHRVCDS HSKAPKVVVG GLERRFCQQC SRFHNISEFD EKKRSCRRRL  240
SDHNARRRKP QQEIQYNSRL SSPFYGGRQQ MSFMMSNPSL VHSRAMGDTA WDSTKFTLTK  300
GYHPLKSSGD GVSREQMHIP GAKLTHFTNM QSSAAKGIPT SKSSVADVSN PGVFQLKSPS  360
AALPEKGYCL EGSKYSPHLD AAPEYGRALS LLSSNSWAPC GSESMALNQI QENEICVSQP  420
LPTMHGIPEG VPLSSSELWL HQLPSAHPPL PGNTNFPEIQ LFITPYEETD LYSSIMN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	232	249	KKRSCRRRLSDHNARRRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G43270.1	2e-60	SBP family protein