PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY87900.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family NF-YC
Protein Properties Length: 134aa    MW: 15022.3 Da    PI: 10.7255
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY87900.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC44.14.5e-1418981897
       NF-YC 18 nhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtd.ifdflvdivp 97
                + ++P  r+k+i+k d+d++++ aea  l++ + +lf+  l+ +s   a e+kr+t+  + i  a +r   + dfl+d  p
  TEY87900.1 18 KLKIPTRRVKNIMKLDKDISKVNAEALFLVASSSQLFLQFLAEKSAHAAVEKKRKTITLQHIRVAAKRHRpTADFLLDSLP 98
                56799*********************************************************98888764389*****987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 134 aa     Download sequence    
MAQQEEGENP GGIDEPHKLK IPTRRVKNIM KLDKDISKVN AEALFLVASS SQLFLQFLAE  60
KSAHAAVEKK RKTITLQHIR VAAKRHRPTA DFLLDSLPVP AEQNHSGDRA KSRPDKKPVP  120
FATRSIDAFF QKTT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43250.12e-38NF-YC family protein