PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY87964.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

LBD

Protein Properties

Length: 132aa MW: 14801.1 Da PI: 9.3999

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY87964.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	146.1	9.8e-46	14	114	1	101
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 +CaaCk+lrr+Ca+dCv+apyfpa++p+kfa+vhk+FGasn+ k+l++l+e +r da++s+vyeA+ar+rdPvyG+vg i++lqqq++ l+++lal+++ TEY87964.1 14 PCAACKLLRRRCAQDCVFAPYFPADDPHKFACVHKVFGASNINKMLQELEERKRGDAVRSMVYEAKARVRDPVYGCVGAISSLQQQIDDLQTQLALTQA 112 7***********************************************************************************************999 PP DUF260 100 el 101 +l TEY87964.1 113 QL 114 85 PP

Sequence ? help Back to Top
Protein Sequence Length: 132 aa Download sequence
MKDISKRRGS AASPCAACKL LRRRCAQDCV FAPYFPADDP HKFACVHKVF GASNINKMLQ 60 ELEERKRGDA VRSMVYEAKA RVRDPVYGCV GAISSLQQQI DDLQTQLALT QAQLVHMRMH 120 AHNNVTQPLA FN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G31320.1	5e-51	LBD family protein