PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY88000.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family GRAS
Protein Properties Length: 189aa    MW: 21540.7 Da    PI: 4.1434
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY88000.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS119.15.4e-371147158308
        GRAS 158 leetgerLakfAeelgvpfefnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFler 256
                 +e+tg+rL++fA+++++pf f+v++ +++++++ + ++++p+E++aV + l+l ++ +++ sle     v+k++ +++P v+vv+e ea+hns+sF +r
  TEY88000.1   1 MEKTGSRLQSFAQSMNLPFLFEVVYLQEMDAFSEDLFSIEPDETVAVYSFLMLRSMISKPKSLET----VMKVLARIRPAVMVVSEVEANHNSPSFIDR 95 
                 589******************************************************88888888....****************************** PP

        GRAS 257 flealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrer 308
                 f+eal +ysa fd+le+ + r +e r+ +E  ++g+ i+n+v    +er+++
  TEY88000.1  96 FMEALLFYSAYFDCLEECMERGNEYRAILEGCFFGEGIMNIVGEGDEEREAE 147
                 *******************************************999998765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 189 aa     Download sequence    
MEKTGSRLQS FAQSMNLPFL FEVVYLQEMD AFSEDLFSIE PDETVAVYSF LMLRSMISKP  60
KSLETVMKVL ARIRPAVMVV SEVEANHNSP SFIDRFMEAL LFYSAYFDCL EECMERGNEY  120
RAILEGCFFG EGIMNIVGEG DEEREAECLE EVFNEFGKGR CCDLEFDGKG LIVGWKGTPI  180
QSVTAWKFS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66350.16e-24GRAS family protein