PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY88013.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family GATA
Protein Properties Length: 115aa    MW: 12921.1 Da    PI: 10.8484
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY88013.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA55.48.5e-182155135
        GATA  1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35
                C+ C+tt TplWR gp g+k+LCnaCG++y kk++
  TEY88013.1 21 CTDCRTTRTPLWRGGPHGPKSLCNACGIKYNKKRR 55
                ********************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 115 aa     Download sequence    
MDLKQQISEE KKIRSSSPKS CTDCRTTRTP LWRGGPHGPK SLCNACGIKY NKKRRESLGL  60
DTGSRKKKRS EDRSSKVGEI LKMRFMRSSK LMSKLREEEQ AAILLMALSC GSVSA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15269KKRRESLGLDTGSRKKKR
25370KKRRESLGLDTGSRKKKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G49300.19e-26GATA family protein