PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY88099.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family LBD
Protein Properties Length: 198aa    MW: 21673.4 Da    PI: 7.3073
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY88099.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260125.52.5e-3981081100
      DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallk 98 
                 +C aCk+lrrkCa+dCv+apyf++eq p++fa++hk+FGasnv+kll ++p  +r +a+ +++yeA+ar+rdPvyG+v++i++lqqq++ l+a++ ++k
  TEY88099.1   8 PCGACKFLRRKCAADCVFAPYFCSEQgPARFAAIHKVFGASNVSKLLLHVPAADRCEAVVTIAYEAQARIRDPVYGCVAHIFALQQQVAYLQAQVMQAK 106
                 7*************************99*******************************************************************9999 PP

      DUF260  99 ee 100
                 ++
  TEY88099.1 107 AQ 108
                 87 PP
Sequence ? help Back to Top
Protein Sequence    Length: 198 aa     Download sequence    
MASGSGSPCG ACKFLRRKCA ADCVFAPYFC SEQGPARFAA IHKVFGASNV SKLLLHVPAA  60
DRCEAVVTIA YEAQARIRDP VYGCVAHIFA LQQQVAYLQA QVMQAKAQLA QNVTDQSSSA  120
RNGDQNQWNC GAMGPIPAAN YSNLYSSISP QSSLDSIDQQ EIQSREDVEH YYYTKKRPSQ  180
TDLSELQALA LRMINNQD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42430.17e-57LBD family protein