PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY88169.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family ARF
Protein Properties Length: 475aa    MW: 51782.4 Da    PI: 6.5664
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY88169.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B376.62.8e-24108210199
                 EEEE-..-HHHHTT-EE--HHH.HTT........---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeeh........ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sef 90 
                 f k+lt+sd+++ g +++p+ +a ++          +++  +tl+ +d++g+ W +++iyr++++r++lt+GW++Fv+a++L +gD+vvF+  +r s+ 
  TEY88169.1 108 FAKILTRSDANNGGGFSVPRFCA-DIilppldfeA-DPPV-QTLVTRDSHGNAWGFRHIYRGTPRRHLLTTGWSKFVNAKRLVAGDSVVFM--KRkSTD 201
                 89*****************7666.666*****954.4444.38999*********************************************..455999 PP

                 ..EEEEE-S CS
          B3  91 elvvkvfrk 99 
                 el+v+++r+
  TEY88169.1 202 ELFVGIRRA 210
                 9******97 PP
2Auxin_resp77.53.3e-26228310283
  Auxin_resp   2 ahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrl.sGtvvgvsdldpvrWpnSkWrsLk 83 
                 +++a  ++ FevvY+P++++++Fvv +ekv++al++++s+Gm+++ma++++d+s+  + +G v++ s+  +  W++S+Wr+L+
  TEY88169.1 228 IESAVRGMHFEVVYYPKVGSPDFVVAAEKVNQALRIPWSAGMKVRMAVDSDDASRLAWiQGGVTAASTPMTGIWRRSPWRMLQ 310
                 56778899************************************************************999**********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 475 aa     Download sequence    
MTSPPTAAAE IDSSIWHAIA GAGVHVPAVN SAVYYFPQGH LEQCSAAANH NFTHTWPWIP  60
CQVISVRYLC DSVSDQVFSR ILLQPLYQFD SLPTGGGSAA ADDEILSFAK ILTRSDANNG  120
GGFSVPRFCA DIILPPLDFE ADPPVQTLVT RDSHGNAWGF RHIYRGTPRR HLLTTGWSKF  180
VNAKRLVAGD SVVFMKRKST DELFVGIRRA ERFGGDEKSE AAEAISAIES AVRGMHFEVV  240
YYPKVGSPDF VVAAEKVNQA LRIPWSAGMK VRMAVDSDDA SRLAWIQGGV TAASTPMTGI  300
WRRSPWRMLQ VNWDDPEGSH ANVSPWEVEY LPLSPLIDPG FHPAKRLRFV PDPGILATDS  360
SLLHQYPPAG MQGARRNHMA AEVLQPPNND PQPPNNVVQP LNDVPQHPTK EPDKEVISIS  420
TVLTIGRSSS DSVSPVSQNG DQAATTFQLF GRKIATSTVS SVPGVERDAV AAHRE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G77850.11e-111ARF family protein