PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY88278.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

CAMTA

Protein Properties

Length: 949aa MW: 106765 Da PI: 6.3656

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY88278.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	165.9	6.7e-52	28	141	4	116
CG-1 4 e.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrrcywl 101 e ++rwlk+ e++ iL+n+++h+l+++ +++p+sgsl L+n++++++frkDG+sw+k+kd +t+ E+he+LKvg+ e+l+cyYah+eenp+fqrr+yw+ TEY88278.1 28 EaQSRWLKPAEVCFILKNYAEHQLAHQVPQKPTSGSLYLFNQRVLKFFRKDGHSWRKRKDQRTIAEAHERLKVGNAEALNCYYAHGEENPKFQRRSYWM 126 4489********************************************************************************************* PP CG-1 102 Leeelekivlvhyle 116 L+ ++ +ivlvhy++ TEY88278.1 127 LDPAYGHIVLVHYRD 141 ***********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 949 aa Download sequence
MLRCNCFGLD RDAKVIISGY DINHLGREAQ SRWLKPAEVC FILKNYAEHQ LAHQVPQKPT 60 SGSLYLFNQR VLKFFRKDGH SWRKRKDQRT IAEAHERLKV GNAEALNCYY AHGEENPKFQ 120 RRSYWMLDPA YGHIVLVHYR DIRVDIKMVF AYVEAVLASL MAQKFLIHDG RENSGSASQL 180 PTSSPSTFSL NPASFASELP DPSFVIGESY ELYHNDSSPN SVEISSSQIV NNHTMNRSEE 240 RANEVSGSSR PDTDHTFERI KHQLSLNDDE ETVFNKLYFV IEDSNDLDVL REYELSNLKP 300 TSTGNIHPLE SDSRVQQYQK PPGTDVDIWK EMLDGSKNFP SAESPPQFGG HETFTLPASL 360 ILEEVDSQKH HTYTPIPHAY HPACSLPVFY QDGLEISLDN NINLTIAQKQ RFTIREISPE 420 WCYTSEGTKI IIIGSFFCDP SECEWACMIG DVEVPVQIIQ KGVLSCYAPA HLQGEVSICI 480 TSGNREACSE VRDFEYRAKS EVSTHSDITG TEAYKNPDEL VSLVRFVQML LSQASESRTD 540 EDSWSQVIDT VLVGTSTSSS ILDWLLQELL KDKLDIWLSS KIQNSNEKGC LSLSKKEQGI 600 IHMVAILGFE WALQPILNSG VSVNFRDNNG WTALHWAARY GREKMVSALI AFGASAGAVT 660 DPNAQDLTGK TPASIAASYG HRGLAGYLSE VELTTHLTSL TLVESELSKG SAALEAERTV 720 NSTPSSDYED EGSLRQTLAA VCNAAQAAAL IQSAFRVHSF RKRQQLKSAI PIGRDEFNDI 780 QGLSTASKLA FRTTRDNNLA AVSIQKTYRG WKGRKDFLSL RQKVVKIQAH VRGYQVRRNY 840 MVCWAVGVLE KVILRWRRRG VGLRGFRAEL ESIDESEGQD ILKVFRKQKV DEAIDEAVSR 900 VLSMVECPEA RQQYRRLLSE YRQAKAKLQN GNGITQYPNV EDKDTTLID

Sequence ? help Back to Top

Protein Sequence Length: 949 aa Download sequence

MLRCNCFGLD RDAKVIISGY DINHLGREAQ SRWLKPAEVC FILKNYAEHQ LAHQVPQKPT  60
SGSLYLFNQR VLKFFRKDGH SWRKRKDQRT IAEAHERLKV GNAEALNCYY AHGEENPKFQ  120
RRSYWMLDPA YGHIVLVHYR DIRVDIKMVF AYVEAVLASL MAQKFLIHDG RENSGSASQL  180
PTSSPSTFSL NPASFASELP DPSFVIGESY ELYHNDSSPN SVEISSSQIV NNHTMNRSEE  240
RANEVSGSSR PDTDHTFERI KHQLSLNDDE ETVFNKLYFV IEDSNDLDVL REYELSNLKP  300
TSTGNIHPLE SDSRVQQYQK PPGTDVDIWK EMLDGSKNFP SAESPPQFGG HETFTLPASL  360
ILEEVDSQKH HTYTPIPHAY HPACSLPVFY QDGLEISLDN NINLTIAQKQ RFTIREISPE  420
WCYTSEGTKI IIIGSFFCDP SECEWACMIG DVEVPVQIIQ KGVLSCYAPA HLQGEVSICI  480
TSGNREACSE VRDFEYRAKS EVSTHSDITG TEAYKNPDEL VSLVRFVQML LSQASESRTD  540
EDSWSQVIDT VLVGTSTSSS ILDWLLQELL KDKLDIWLSS KIQNSNEKGC LSLSKKEQGI  600
IHMVAILGFE WALQPILNSG VSVNFRDNNG WTALHWAARY GREKMVSALI AFGASAGAVT  660
DPNAQDLTGK TPASIAASYG HRGLAGYLSE VELTTHLTSL TLVESELSKG SAALEAERTV  720
NSTPSSDYED EGSLRQTLAA VCNAAQAAAL IQSAFRVHSF RKRQQLKSAI PIGRDEFNDI  780
QGLSTASKLA FRTTRDNNLA AVSIQKTYRG WKGRKDFLSL RQKVVKIQAH VRGYQVRRNY  840
MVCWAVGVLE KVILRWRRRG VGLRGFRAEL ESIDESEGQD ILKVFRKQKV DEAIDEAVSR  900
VLSMVECPEA RQQYRRLLSE YRQAKAKLQN GNGITQYPNV EDKDTTLID

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G67310.1	1e-174	CAMTA family protein