PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY88657.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

HD-ZIP

Protein Properties

Length: 286aa MW: 31698.1 Da PI: 5.0155

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY88657.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	54.5	2e-17	130	184	2	56
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ +++keq Lee F+++++++ +++ LAk+l+L rqV vWFqNrRa+ k TEY88657.1 130 RKKLRLSKEQSAFLEESFKEHNTLNPKQKLALAKQLNLRARQVEVWFQNRRARTK 184 778899***********************************************98 PP
2	HD-ZIP_I/II	125.7	2.1e-40	130	220	1	92
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 +kk+rlskeq+++LEesF+e+++L+p++K +la++L+l++rqv+vWFqnrRARtk+kq+E+d+e+Lkr++++l+een+rL+ke +eLr +lk TEY88657.1 130 RKKLRLSKEQSAFLEESFKEHNTLNPKQKLALAKQLNLRARQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLHKELQELR-ALK 220 69*************************************************************************************9.555 PP

Sequence ? help Back to Top
Protein Sequence Length: 286 aa Download sequence
MELGLSLGDA SKSLGFLKDN NSSTNQDPTK ATGFDFCMSL GLSSKENGED EDTSAEDGND 60 DNQEETPLQL NLLPRLWSSD NGSSENGSSG KGLDVNRTPV AEEASSANKR EFEGAGNDND 120 DDDDNALNTR KKLRLSKEQS AFLEESFKEH NTLNPKQKLA LAKQLNLRAR QVEVWFQNRR 180 ARTKLKQTEV DCEYLKRCCE TLTEENRRLH KELQELRALK TSNPFYMQLP ATTLTMCPSC 240 ERVASTPAAA AAKADSNIPK AIPFPLARPR FYPFPQAAHP NQPAAS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	129	135	TRKKLRL
2	179	187	RRARTKLKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06710.1	7e-57	HD-ZIP family protein