PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY88754.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

NF-YC

Protein Properties

Length: 79aa MW: 8843.46 Da PI: 9.7108

Description

NF-YC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY88754.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YC	49.4	9.7e-16	18	74	18	74
NF-YC 18 nhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtl 74 ++++P arikki++adedv +i+ +Pvl+ska elf+ +l r++ + + +t+ TEY88754.1 18 DTRFPAARIKKIMQADEDVGKIAMAVPVLVSKALELFLQDLCDRTYDITVQRGAKTV 74 689******************************************999988887776 PP

Sequence ? help Back to Top
Protein Sequence Length: 79 aa Download sequence
MNFCYGSPNL TAMKKKLDTR FPAARIKKIM QADEDVGKIA MAVPVLVSKA LELFLQDLCD 60 RTYDITVQRG AKTVNSLHL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G12480.1	2e-38	NF-YC family protein