PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY88935.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

TCP

Protein Properties

Length: 206aa MW: 22949 Da PI: 10.0689

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY88935.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	95.7	9e-30	36	130	2	94
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec...eaesssssasnsssgkaaksa 94 g+kdrhsk++T +g+RdRRvRls+++a++++dLq++LG+ ++sk ++WLl+ ak +i l+ + ++++ c ++++ s+++++ + ++ +++a TEY88935.1 36 VGGKDRHSKVSTVRGLRDRRVRLSVPTAIQLYDLQERLGLNQPSKVVDWLLNVAKNEIAGLPPL-QIPQGICfgeKHNEASEQGHELNLQNPSSFA 130 689*************************************************************.5666588763333333333323333222222 PP

Sequence ? help Back to Top
Protein Sequence Length: 206 aa Download sequence
MIPKVQESSS KGSDFTSTST WSRLKDPRIV RVSRAVGGKD RHSKVSTVRG LRDRRVRLSV 60 PTAIQLYDLQ ERLGLNQPSK VVDWLLNVAK NEIAGLPPLQ IPQGICFGEK HNEASEQGHE 120 LNLQNPSSFA TLMTSNLSLS QTPMSLGLAA PQHQDFAYQT GSYFVPQIDM KHPSFHSLEM 180 SSSTHVRPSD FNMNVDLLPS QNKRLV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G02150.1	8e-42	TCP family protein