PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY89113.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

HD-ZIP

Protein Properties

Length: 257aa MW: 29349.8 Da PI: 6.7277

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY89113.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	56.2	5.7e-18	60	113	3	56
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k+++++ eq+++Le+ Fe +++ e++ +LA+ lgL+ rq+ +WFqNrRa++k TEY89113.1 60 KKRRLNLEQVKALEKSFELGNKLEPERKMQLARALGLQPRQIAIWFQNRRARWK 113 4557899**********************************************9 PP
2	HD-ZIP_I/II	129.5	1.3e-41	59	149	1	91
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 ekkrrl+ eqvk+LE+sFe +kLeperK++lar+Lglqprq+a+WFqnrRAR+ktkqlEkdy++Lkr+++alk++n+ L++++++L+++l TEY89113.1 59 EKKRRLNLEQVKALEKSFELGNKLEPERKMQLARALGLQPRQIAIWFQNRRARWKTKQLEKDYDVLKRQFEALKADNDVLKSQNKKLQTQL 149 69**************************************************************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 257 aa Download sequence
MAYVPADSMF RSHDDVPQDF HGIPEFLMRR SMSFSGMDRA EEFHADDEGS DDGSQLLGEK 60 KRRLNLEQVK ALEKSFELGN KLEPERKMQL ARALGLQPRQ IAIWFQNRRA RWKTKQLEKD 120 YDVLKRQFEA LKADNDVLKS QNKKLQTQLL GLKGGESAAG AINLNKDNEG SWSNGSDTSC 180 EVNIKTSSAT ESAMYNQRNK HRSMFPPPQT LTQLLHGSGR AEQHHSMPAA NECFGTMFAG 240 IEETQEFWPW SEQQNFH

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	108	116	RRARWKTKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69780.1	7e-68	HD-ZIP family protein