PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY89335.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family GRAS
Protein Properties Length: 480aa    MW: 53103.4 Da    PI: 5.1052
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY89335.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS292.21.4e-891294792374
        GRAS   2 velLlecAeavssgdlelaqalLarlsel.aspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaN 99 
                 v+ L++ Ae++++++ +l q +Larl+++ +sp+g+p+qR+a+yf+eAL++ l++         +++ t   + +++++a+k+fs +sPi+ fs +taN
  TEY89335.1 129 VDELIRLAECFETNSIQLGQVILARLNQRlRSPSGKPLQRAAFYFKEALQSLLTG---------STQWT---EIIQTIKAHKTFSSISPIPMFSSFTAN 215
                 678*************************99*************************.........44444...59************************* PP

        GRAS 100 qaIleavegeervHiiDfdisqGlQWpaLlqaLasRp..egppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrv 196
                 qa+l+a++g+ +vH++Dfdi+ G++W++++++L++++  +  p lRi ++++++   + + + + e+L++fA+e  + fe+++++ +++e l+++++++
  TEY89335.1 216 QAVLDALDGSAHVHVVDFDIGLGGHWASFIRELSEKSenSRRPALRISALVPED--YAAQSRLISENLTQFARESSIGFEIDFVAIQTFEYLSFKSIKF 312
                 ***********************************99666789*********55..9999999************************************ PP

        GRAS 197 kpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvv.veqeadh..nsesFlerflealeyysalfdsl.eaklpres.eerikvErell 290
                  +gE++aV l+ +++r +          + +L+ ++++ P+vvvv v+ e ++  +++s+ + +++ le+ys+l++sl +a++++   e+++k+E++++
  TEY89335.1 313 LEGEKVAVLLSPAIFRQV------G---SGFLSDLRRVAPQVVVVqVDGEGQMgfGTASYRQAVIDGLEVYSTLLESLeAANFSNGGgEWMRKIEEFVV 402
                 **************9998......4...48***********998756777555459**********************77788777789********** PP

        GRAS 291 greivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                  ++iv  v ++g++        + Wre++ +aG+k+v +s++a+ qa++llr+v+++g++v +++++++l+W+drpLv++SaWr
  TEY89335.1 403 YPRIVGGVEAAGRR-------GAAWREAMVAAGMKQVGMSQFAEFQAECLLRRVQVRGFHVVKRQAEMLLCWHDRPLVATSAWR 479
                 ************98.......789***********************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 480 aa     Download sequence    
MKVPFPANNP NPKPASAYEP KSVLDLRGSP SPVADQKLAS KLEDHVLITP QLDDWDSLMR  60
DLGLHDDPNP VSKPFPQPDP TLPDFPPANS FDESAQFVTS DLGLLPDIQP YTQNPNPIGS  120
LADVGFDYVD ELIRLAECFE TNSIQLGQVI LARLNQRLRS PSGKPLQRAA FYFKEALQSL  180
LTGSTQWTEI IQTIKAHKTF SSISPIPMFS SFTANQAVLD ALDGSAHVHV VDFDIGLGGH  240
WASFIRELSE KSENSRRPAL RISALVPEDY AAQSRLISEN LTQFARESSI GFEIDFVAIQ  300
TFEYLSFKSI KFLEGEKVAV LLSPAIFRQV GSGFLSDLRR VAPQVVVVQV DGEGQMGFGT  360
ASYRQAVIDG LEVYSTLLES LEAANFSNGG GEWMRKIEEF VVYPRIVGGV EAAGRRGAAW  420
REAMVAAGMK QVGMSQFAEF QAECLLRRVQ VRGFHVVKRQ AEMLLCWHDR PLVATSAWRF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36710.11e-115GRAS family protein