PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY89337.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

HD-ZIP

Protein Properties

Length: 203aa MW: 23729.9 Da PI: 8.3169

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY89337.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	64.7	1.3e-20	54	106	4	56
-SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 ++++++eql Le+ F +++++ +e++ +LA++lgL+ rqV vWFqNrRa++k TEY89337.1 54 KRKLSEEQLSMLERSFGSEHKLETERKDRLAAELGLDPRQVAVWFQNRRARWK 106 45899***********************************************9 PP
2	HD-ZIP_I/II	116.8	1.2e-37	53	143	2	92
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 +kr+ls+eq+++LE+sF +e+kLe+erK +la eLgl+prqvavWFqnrRAR+k k+lE+++ L+++y++ + e++rL++ev +++e+l+ TEY89337.1 53 RKRKLSEEQLSMLERSFGSEHKLETERKDRLAAELGLDPRQVAVWFQNRRARWKIKKLEEEFFNLRSNYESTVVEKCRLQTEVLKIKEQLS 143 8**************************************************************************************9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 203 aa Download sequence
MSHEFSDMFD YCSVGIITQF VPKQGEVKSV KPRRRPRKGK GGEGEAEGGA MIRKRKLSEE 60 QLSMLERSFG SEHKLETERK DRLAAELGLD PRQVAVWFQN RRARWKIKKL EEEFFNLRSN 120 YESTVVEKCR LQTEVLKIKE QLSGAEKEIQ RLSEHWERVR ANSPTSSLSE FGIECLDNVF 180 CVPDTVTNYA HAFQWDDRFY YIA

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	31	37	KPRRRPR
2	33	38	RRRPRK
3	34	40	RRPRKGK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G18550.1	8e-50	HD-ZIP family protein