PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY89352.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

LBD

Protein Properties

Length: 255aa MW: 27378.2 Da PI: 6.8663

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY89352.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	100.1	2.1e-31	4	107	1	99
DUF260 1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkael 94 +C++C+vlr++C+++C ++p++ p++q++++ +++k++G++ +++l++a p++ r+++++sl+yeA+ r+ +PvyG+vg+++++++ql+q+++e+ TEY89352.1 4 SCNGCRVLRKGCSQSCSIRPCLewiksPESQANATVFLAKFYGRAGLMNLINASPDNLRPTTFRSLLYEACGRIVNPVYGSVGLMWSGSWQLCQAAVEA 102 6*************************************************************************************************9 PP DUF260 95 allke 99 +l ++ TEY89352.1 103 VLKGA 107 98766 PP

Sequence ? help Back to Top
Protein Sequence Length: 255 aa Download sequence
MRLSCNGCRV LRKGCSQSCS IRPCLEWIKS PESQANATVF LAKFYGRAGL MNLINASPDN 60 LRPTTFRSLL YEACGRIVNP VYGSVGLMWS GSWQLCQAAV EAVLKGAPIA PMPTDAAEAI 120 NGPPLKAFDI RHVTKEDTLS GSDELHRVRN RCRFKRARRS RVGSPDESGN GSALSHQSEP 180 PDEESLASAQ TPEPVAGHSL ETEGEDGMGL DLTLGFEPIK GCVKPKSWKL GEAVGGSAEE 240 AGLCKMELGL DFSAL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G02550.1	2e-89	LBD family protein