PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY89370.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family C3H
Protein Properties Length: 311aa    MW: 34835.9 Da    PI: 6.7747
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY89370.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH45.51.3e-14236260226
                 -S---SGGGGTS--TTTTT-SS-SS CS
     zf-CCCH   2 ktelCrffartGtCkyGdrCkFaHg 26 
                 ktelC+ +++tG C+yG +C+FaHg
  TEY89370.1 236 KTELCNKWQETGACPYGKNCQFAHG 260
                 9***********************8 PP
2zf-CCCH20.11.1e-06273298126
                 --S---SGGGGTS--TTTTT-SS-SS CS
     zf-CCCH   1 yktelCrffartGtCkyGdrCkFaHg 26 
                 ykte Cr  +++  C+yG rC+F H+
  TEY89370.1 273 YKTEVCRMVLAGDVCPYGHRCHFRHS 298
                 9**********55**********998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 311 aa     Download sequence    
MQRPDISYDS LLASSAGDKS AAASLLFSFS NPFLPPTSPT YVNSDASFYS SLFQNHSSST  60
TSDTASFDGC DDADRRLQDA SCVVEYQQLY NRYTLCLAQL HDSIEEADAL RRDNESLRLS  120
NADLTHRIAL LFSRDRLVSD FNRLNAASPS AAAHLSLTQP LAELNRVERR SIERVTLPKS  180
ISVRTSGYLK MTRPGRDTTS DKVVSQPTPE LQRVYVGGST AENVEELDVY NQGMTKTELC  240
NKWQETGACP YGKNCQFAHG INELRPVIRH PRYKTEVCRM VLAGDVCPYG HRCHFRHSLT  300
EEERLMVAPP R
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66810.16e-67C3H family protein