PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY89450.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family M-type_MADS
Protein Properties Length: 278aa    MW: 31442.8 Da    PI: 4.5719
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY89450.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF34.42.9e-111048240
                ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE CS
      SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviif 40
                +ienk  r  tf kR++ + KK e L +LCd+ +++ii 
  TEY89450.1 10 FIENKKSRLLTFKKRKEALKKKVEQLTTLCDVPACMIIR 48
                8************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 278 aa     Download sequence    
MGRAKLKLQF IENKKSRLLT FKKRKEALKK KVEQLTTLCD VPACMIIRDP TTNSTFIWPD  60
DSAQIRRLIG SYKADPGAVK AFGVSDFFNQ RQGNALEKNA EAESGTWDDR LNHMDESQLL  120
ELSGAVRAKA EALRSRIDFL KREPMMKEEE NSNEMLDLED IFDQDEILSM AANTNDQFPV  180
TDFYCPQALA MMEKEKSNDN VVLDLVGLGG IVDQDVSFSI GDVMDFARAN APLNLPQDYT  240
FSVADVMANG QLPAVPQPFV DHNYLNYGYC YPWMGIRM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G55690.12e-11M-type_MADS family protein