PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY89553.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family M-type_MADS
Protein Properties Length: 341aa    MW: 38833.4 Da    PI: 3.9605
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY89553.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF33.36.3e-11442341
                --SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE- CS
      SRF-TF  3 ienksnrqvtfskRrngilKKAeELSvLCdaevaviifs 41
                ++n+  r v + kR++g+ KK e L +LCd+ +++ii  
  TEY89553.1  4 VKNEKARRVALKKRKEGLVKKIEQLTTLCDVPACMIIST 42
                68999*******************************965 PP
Sequence ? help Back to Top
Protein Sequence    Length: 341 aa     Download sequence    
MELVKNEKAR RVALKKRKEG LVKKIEQLTT LCDVPACMII STNSSFIWPD DFSQVRRLID  60
SYKDNPAAVK PYGLSDFFKG RQKTKYDDRL GLMNESQLRE LGQAVRSRID FLKREAMVKK  120
EKDVVLDLDE FEHIDQDYIF SAADDVMVKK ESDVMFDLDE IEEEIDQDDI FSAAEDVFID  180
LDKVEEIDQD DIFSAAAAAA ADVMVKGNDV MFDLDEEIDQ DDIFSAADDV MAAMVKEEND  240
VFMYLDEIGD IDQDAIFSAM SANTQVPVPD YYCPPPLMDH NYLSYVNENV NWCVDQNPNC  300
SSVDVNQNVN WCADQNLNCS SMDVNWFAGD GGGVLARYLW H
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G22590.23e-10M-type_MADS family protein