PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY89751.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family M-type_MADS
Protein Properties Length: 245aa    MW: 28668.9 Da    PI: 4.9192
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY89751.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF28.22.5e-091302150
                HHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS
      SRF-TF 21 lKKAeELSvLCdaevaviifsstgklyeys 50
                +KKA+E+ v Cd++va + fs++g++  ++
  TEY89751.1  1 MKKANEIAVCCDVDVAFLAFSPSGRVSKFC 30
                8**************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 245 aa     Download sequence    
MKKANEIAVC CDVDVAFLAF SPSGRVSKFC NQKRIEDVLH RYNLDLQLKK TGLELQILET  60
DLRDYEIGPE QEPSLHQLSW CERNLNQSLQ RVIARKIELE SQSRKVFPTS VNQNEQFSMF  120
EKPISGQILM QLDPWIRPYS FHDHDNASSV VFSDAVHMST QNSRNMHLDP SNARIDNNVD  180
FRTTNFDQMQ RNYQQFHHEK EASQGPQFDN LAQETEEDNK LGSLNRQKSS PWEWDDLLLD  240
ETFNF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G77980.15e-11MIKC_MADS family protein