PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY89803.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

LBD

Protein Properties

Length: 122aa MW: 13392.3 Da PI: 8.1987

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY89803.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	107.6	1e-33	8	93	15	100
DUF260 15 dCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallkee 100 +Cv+apyfp ++p+kf vhk+FGasnv+kll++l+ +reda++sl+yeAe r+rdPvyG+vg+i+ lqq+l+q++++l+ +k+e TEY89803.1 8 ECVFAPYFPPDNPQKFTTVHKVFGASNVSKLLNELSAAQREDAVNSLAYEAEYRLRDPVYGCVGLISVLQQRLRQVQVDLENAKKE 93 8********************************************************************************99987 PP

Sequence ? help Back to Top
Protein Sequence Length: 122 aa Download sequence
MIKNIHVECV FAPYFPPDNP QKFTTVHKVF GASNVSKLLN ELSAAQREDA VNSLAYEAEY 60 RLRDPVYGCV GLISVLQQRL RQVQVDLENA KKELYTYIGP SAAAAICRAA GGCCSGARRN 120 DA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G66870.1	4e-46	LBD family protein