PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY89889.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family M-type_MADS
Protein Properties Length: 164aa    MW: 18846.4 Da    PI: 7.5808
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY89889.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF60.22.6e-191762247
                ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEE CS
      SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgkly 47
                +ie +   + tfskRr+g++KKA+ELS+LC+a+v + +fs+tgk +
  TEY89889.1 17 KIEKENDCYATFSKRRQGLFKKASELSTLCEADVGLFVFSPTGKPF 62
                6888888999*********************************965 PP
Sequence ? help Back to Top
Protein Sequence    Length: 164 aa     Download sequence    
MDQKKTAKGR QKIAIEKIEK ENDCYATFSK RRQGLFKKAS ELSTLCEADV GLFVFSPTGK  60
PFSFFHPSLE PVVSRFLSVG GGRGDDASRL AEAFTRTRVR HLNQMIDKIG AKLDDEEARE  120
KELDQAAATR ERWWEMPVED LDKEQVEQLI AFMRNLQSEL HKMH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36590.18e-33M-type_MADS family protein