PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY90185.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family C3H
Protein Properties Length: 223aa    MW: 26292.9 Da    PI: 11.3791
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY90185.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH29.41.4e-091437225
                -S---SGGGGTS--TTTTT-SS-S CS
     zf-CCCH  2 ktelCrffartGtCkyGdrCkFaH 25
                ++++C+f+++ G C++GdrC++ H
  TEY90185.1 14 DRVNCPFYFKIGACRHGDRCSRLH 37
                6899******************** PP
Sequence ? help Back to Top
Protein Sequence    Length: 223 aa     Download sequence    
MAEHLASIFG TEKDRVNCPF YFKIGACRHG DRCSRLHTKP STAQRFCFPI LTDFREATCR  60
QYEEDACNRG GYCNFMRLKR ISRELRHQLF GKRRSRRSRS RSRSPYRHRS YDDRSHGSRS  120
HSRTHDDRDH HGSRSRRRKS TSPRSRRGRS RSPGGRRNRS PVREGSEERR AKIAEWNREK  180
EEAEHANSKA SVGGEDRRAG NDDSHIVENE GNDVRRQQNG YRY
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1135140SRRRKS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G44785.13e-23C3H family protein