PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY90534.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family LBD
Protein Properties Length: 190aa    MW: 20956.7 Da    PI: 8.2894
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY90534.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260963.9e-302103197
      DUF260   1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkael 94 
                 +C++C++lr++C+++C+l++ +     p++q++++ +v+k+FG++ ++++l+++p+++r+++++sl++eA+ r+ +Pv+Gavg++++++++++q+++e+
  TEY90534.1   2 SCNGCRILRKGCNEKCILRESIqcmesPQSQANATLFVAKFFGRAGLISFLSSVPHSQRPALFQSLLFEACGRTVNPVNGAVGLLWTGNWHVCQSAVET 100
                 6*********************999***********************************************************************998 PP

      DUF260  95 all 97 
                 +l+
  TEY90534.1 101 VLR 103
                 875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 190 aa     Download sequence    
MSCNGCRILR KGCNEKCILR ESIQCMESPQ SQANATLFVA KFFGRAGLIS FLSSVPHSQR  60
PALFQSLLFE ACGRTVNPVN GAVGLLWTGN WHVCQSAVET VLRGGVIRPL PEFEEGSSPE  120
TNENSLYASR DLNKRLKASE GEGLAAPRSR GRKRPATPSD ESETTTLESG YDLQLNRHER  180
DEAKLLRLFS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G49940.11e-66LBD family protein