PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY90569.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

MIKC_MADS

Protein Properties

Length: 220aa MW: 24949 Da PI: 10.2522

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY90569.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	84.4	6.9e-27	9	59	1	51
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 k+i+n + rqvtfskRr+g++KKA ELS+LCdae+a+i+fs +gkl++yss TEY90569.1 9 KKIDNLTTRQVTFSKRRKGLFKKARELSTLCDAEIALIVFSASGKLFDYSS 59 68***********************************************96 PP
2	K-box	29.6	2.8e-11	126	187	22	83
K-box 22 akLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkk 83 kL + + +L e+++l Ge L+ Lsl L +Le+ +e ++++iR++K+ l+e+ +l + TEY90569.1 126 GKLSRHLMELSIELKQLEGEHLQGLSLASLIKLEKLIEGGMSRIRKTKEFKLMEENARLNTQ 187 68999999*****************************************9999998877655 PP

Sequence ? help Back to Top
Protein Sequence Length: 220 aa Download sequence
MVRQKIEIKK IDNLTTRQVT FSKRRKGLFK KARELSTLCD AEIALIVFSA SGKLFDYSSS 60 RFSLSLSFSL SLSLTHTHTH TERSTTGVVW EVNCVMMQII QRHDHQTEFK LLKQPPLHIQ 120 GSDGLGKLSR HLMELSIELK QLEGEHLQGL SLASLIKLEK LIEGGMSRIR KTKEFKLMEE 180 NARLNTQPIE KSSKRNAFDL GIPPISDSNC SDTFLKLGLP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22540.1	2e-38	MIKC_MADS family protein