PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY90824.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

Trihelix

Protein Properties

Length: 367aa MW: 40828.3 Da PI: 10.4806

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY90824.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	61.6	1.9e-19	54	136	2	86
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkm.rergf...erspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 W++qe+laLi+a++e++ +l+rg+lk+ +Weevs+ + ++ gf +++++qC++k+e+l+kry+ + + + +++yf+ ++ TEY90824.1 54 WSHQETLALIQAYQEKWYSLKRGQLKAFQWEEVSITVaARCGFdepSKTATQCRHKIEKLRKRYRSELQKPYLN------SWQYFELMD 136 **********************************966668866579***************998888773......489998887 PP

Sequence ? help Back to Top
Protein Sequence Length: 367 aa Download sequence
MTSFSSSSPS ASPPPPPPRH SLSASLSPSP SPNRALPQPE SKSPPPKRSP PLPWSHQETL 60 ALIQAYQEKW YSLKRGQLKA FQWEEVSITV AARCGFDEPS KTATQCRHKI EKLRKRYRSE 120 LQKPYLNSWQ YFELMDQMER GPIPLDARPI TMAKSFPNHI SSNSNNNVSN FTSLYSNSAD 180 FYHNGGGGGG GGDSGVSDDS DEKWNTAAAA RNKSKSINNI VRGAVRGGKA AVVVGRGLGG 240 GDRGGRVVRN FVKGRPMEYF GMEMISEAQK DGGHRSHKRA KMVDIGPING RKWIENLDSH 300 GWFLWMEKKR MEMISEAQKD GGHRILTAIA GLFVLLRKYE AILREFGAHK RAKDCSNNHL 360 EVLMLRL

Sequence ? help Back to Top

Protein Sequence Length: 367 aa Download sequence

MTSFSSSSPS ASPPPPPPRH SLSASLSPSP SPNRALPQPE SKSPPPKRSP PLPWSHQETL  60
ALIQAYQEKW YSLKRGQLKA FQWEEVSITV AARCGFDEPS KTATQCRHKI EKLRKRYRSE  120
LQKPYLNSWQ YFELMDQMER GPIPLDARPI TMAKSFPNHI SSNSNNNVSN FTSLYSNSAD  180
FYHNGGGGGG GGDSGVSDDS DEKWNTAAAA RNKSKSINNI VRGAVRGGKA AVVVGRGLGG  240
GDRGGRVVRN FVKGRPMEYF GMEMISEAQK DGGHRSHKRA KMVDIGPING RKWIENLDSH  300
GWFLWMEKKR MEMISEAQKD GGHRILTAIA GLFVLLRKYE AILREFGAHK RAKDCSNNHL  360
EVLMLRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G44730.1	5e-24	Trihelix family protein