PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY91389.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family MIKC_MADS
Protein Properties Length: 236aa    MW: 27677.5 Da    PI: 9.8936
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY91389.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF916e-29959151
                S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
      SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                k+ien++nrqvt+skRrng++KKA+EL vLCda++++i++sst+kl+ey s
  TEY91389.1  9 KKIENQTNRQVTYSKRRNGLFKKAHELTVLCDAKISIIMISSTQKLHEYTS 59
                68***********************************************75 PP
2K-box56.31.4e-1971163199
       K-box   1 yqkssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 
                 yqk+  ++ +++++e++q++l+kLk+ ++nL  e+R++ Ge+L++L ++++ +L +++++s+      K++++ + i++++kk ++++e+++ L  +++
  TEY91389.1  71 YQKTVRTDIWSSHYEKMQEHLKKLKEINRNLMMEIRQRRGESLNDLGYEQMVNLIEDMDNSM------KYKVISSRIDTSRKKLRNVEEIHRGLVLQFD 163
                 78888899****************************************************97......8***********************9988775 PP
Sequence ? help Back to Top
Protein Sequence    Length: 236 aa     Download sequence    
MARGKIQIKK IENQTNRQVT YSKRRNGLFK KAHELTVLCD AKISIIMISS TQKLHEYTSP  60
TITTKQIVDE YQKTVRTDIW SSHYEKMQEH LKKLKEINRN LMMEIRQRRG ESLNDLGYEQ  120
MVNLIEDMDN SMKYKVISSR IDTSRKKLRN VEEIHRGLVL QFDARQEDPH YGLVENEGDY  180
NSMLGFPHGR PRIIAVRLPP NNHHPHPHHH HHHHHHHPSL HSGTGASDLT TFALLE
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
199109RNLMMEIRQRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54340.17e-79MIKC_MADS family protein