PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY91597.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family M-type_MADS
Protein Properties Length: 262aa    MW: 28864.4 Da    PI: 7.6805
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY91597.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF68.56.4e-223274244
                ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTS CS
      SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstg 44
                +ien++n qvtfskRr+g++KKA+ELS+LC+ae a+++fs+ +
  TEY91597.1 32 KIENDTNLQVTFSKRRAGVFKKASELSILCGAECALVVFSPGQ 74
                79**************************************965 PP
Sequence ? help Back to Top
Protein Sequence    Length: 262 aa     Download sequence    
MHPEDGDDHM MVHPENEQRR KGKGRQKIEM AKIENDTNLQ VTFSKRRAGV FKKASELSIL  60
CGAECALVVF SPGQQAPLLR PPQRRSCHQQ FIEDLCIRFL QANGGGGGAP PPVNAAERMI  120
MVHSEAATAQ RNQELVALET RVEQAKQRRR ELDGMVPPLQ MENLNYEQLE QLRNSVLMYK  180
HGVGAKFSGA TSSSVGPGAY RYGQPGLGYT VQYPAMGDNN GMAGYNYGDP SAVVPYDPAT  240
GTSNDNYGGF PGNYHHHHHP GY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60440.13e-24M-type_MADS family protein