PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY91606.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

CO-like

Protein Properties

Length: 368aa MW: 40547.6 Da PI: 7.1393

Description

CO-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY91606.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	28	4.7e-09	44	89	3	42
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg......Htvvpl 42 ++C+++ +++++ C +++ lC+dC H + H+++p+ TEY91606.1 44 SQICDNCAAEPASFSCSTDGLVLCQDCDWDAHGSrlvaaaHDRCPV 89 589************************99944899999998885 PP
2	CCT	63.4	6.9e-22	320	363	1	44
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44 R +a++RY+eK+ktR+++K+irYesRKa+A++R+RvKGrFvk++ TEY91606.1 320 RGNAMQRYQEKKKTRRYDKHIRYESRKARADTRKRVKGRFVKAQ 363 7789**************************************87 PP

Sequence ? help Back to Top
Protein Sequence Length: 368 aa Download sequence
MVSCDFCGER QAVLYCRADS AKLCLSCDHH VHCANALSKK HLRSQICDNC AAEPASFSCS 60 TDGLVLCQDC DWDAHGSRLV AAAHDRCPVD SFSGVPSAFE LAAAWGLEIE EKKPAEYEWG 120 GLLDELMVPN ASSVIYSDCG GELVKKKRNP SCGKQKQGGG FTSLLMMQTP ANQKEERNML 180 WNTTTACDHS AQIWDFNLGQ LRGHEESSPV ELEFGGNNMY TMKSYGELLK ESSLAKRRGV 240 DVSGVNCSIA QEDNIIPFNS ATDNRTPSQG PATSESNNVP ASRPESGSMD IQFMSQSILM 300 TNESAAAMSK SDIELMAKNR GNAMQRYQEK KKTRRYDKHI RYESRKARAD TRKRVKGRFV 360 KAQEAPAG

Sequence ? help Back to Top

Protein Sequence Length: 368 aa Download sequence

MVSCDFCGER QAVLYCRADS AKLCLSCDHH VHCANALSKK HLRSQICDNC AAEPASFSCS  60
TDGLVLCQDC DWDAHGSRLV AAAHDRCPVD SFSGVPSAFE LAAAWGLEIE EKKPAEYEWG  120
GLLDELMVPN ASSVIYSDCG GELVKKKRNP SCGKQKQGGG FTSLLMMQTP ANQKEERNML  180
WNTTTACDHS AQIWDFNLGQ LRGHEESSPV ELEFGGNNMY TMKSYGELLK ESSLAKRRGV  240
DVSGVNCSIA QEDNIIPFNS ATDNRTPSQG PATSESNNVP ASRPESGSMD IQFMSQSILM  300
TNESAAAMSK SDIELMAKNR GNAMQRYQEK KKTRRYDKHI RYESRKARAD TRKRVKGRFV  360
KAQEAPAG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33500.1	9e-98	CO-like family protein