PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY91639.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

SBP

Protein Properties

Length: 414aa MW: 45302.5 Da PI: 8.3226

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY91639.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	127.7	4.4e-40	145	222	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +C vegC++dls+ak+yhr+h+vC++hskap+v+++gle+rfCqqCsrfh+ sefDe+krsCrrrL++hn+rrrk+q+ TEY91639.1 145 RCVVEGCNVDLSTAKDYHRKHRVCNIHSKAPKVIIDGLERRFCQQCSRFHSPSEFDEKKRSCRRRLSDHNARRRKPQQ 222 6**************************************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 414 aa Download sequence
MDWNTKWDWE SYDALGSKKL QLVDWTVIDD REIDAESFNL IAGCGNSGAS GSDGGRVSSA 60 KSSISVSDSS AKNLMANEDF SGNFKITESE GTPEASIGSV EPLIGLKLGK RTYFENSGAG 120 SHVKSASRAS LKKTKLAGGN LPAPRCVVEG CNVDLSTAKD YHRKHRVCNI HSKAPKVIID 180 GLERRFCQQC SRFHSPSEFD EKKRSCRRRL SDHNARRRKP QQDVIQYATR LPSPFYGGRQ 240 QMSFLLSNGP PVHAKFTLTK EYHPSKSSGD RASSEKMHIP GAKHPQFVNS AAKGFLASKI 300 SVADVSNPDT EASLCSKGSP YSSHLDAAPE YPRALSLLSN NSWGAESVAF NPIQENEARA 360 TQPTMYGIPE GTPLSSSEFW LHPPSAHQPW PADANFQLFV TPCEETGLYS NIMN

Sequence ? help Back to Top

Protein Sequence Length: 414 aa Download sequence

MDWNTKWDWE SYDALGSKKL QLVDWTVIDD REIDAESFNL IAGCGNSGAS GSDGGRVSSA  60
KSSISVSDSS AKNLMANEDF SGNFKITESE GTPEASIGSV EPLIGLKLGK RTYFENSGAG  120
SHVKSASRAS LKKTKLAGGN LPAPRCVVEG CNVDLSTAKD YHRKHRVCNI HSKAPKVIID  180
GLERRFCQQC SRFHSPSEFD EKKRSCRRRL SDHNARRRKP QQDVIQYATR LPSPFYGGRQ  240
QMSFLLSNGP PVHAKFTLTK EYHPSKSSGD RASSEKMHIP GAKHPQFVNS AAKGFLASKI  300
SVADVSNPDT EASLCSKGSP YSSHLDAAPE YPRALSLLSN NSWGAESVAF NPIQENEARA  360
TQPTMYGIPE GTPLSSSEFW LHPPSAHQPW PADANFQLFV TPCEETGLYS NIMN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	202	219	KKRSCRRRLSDHNARRRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G43270.1	2e-54	SBP family protein