PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY91868.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family GATA
Protein Properties Length: 315aa    MW: 34072.8 Da    PI: 7.7405
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY91868.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA55.11e-17191225135
        GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                 C +C++ kTp+WR gp g+ktLCnaCG++y++ +l
  TEY91868.1 191 CLHCQAEKTPQWRAGPMGPKTLCNACGVRYKSGRL 225
                 99*****************************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 315 aa     Download sequence    
MEILDPSGAC FTDDLLNFNL EGEGEGEGEE ESHTIFKGAS ALKTPKAAAG LGRGPLPGPF  60
PEFVEEEELE WLSNKDAFPS VETCFGILAD NPELVMNHQS PISVLENSSS SSHSNASSGS  120
VSVASCCNSL KVPTNYPVRA RSKRRRRWTG YGNLPSQQHL WLNPVSIKTK KEVASSFALA  180
PSPAGGMGRR CLHCQAEKTP QWRAGPMGPK TLCNACGVRY KSGRLLPEYR PASSPTFSSV  240
LLGKCWFSEV DVAVAFVSCF FNIALISYCE NLNLVDVCVS GFVLYTKCSK QAHLVKNACK  300
DSRLLCSTKI VATGH
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1143170KRRRRWTGYGNLPSQQHLWLNPVSIKTK
2144171KRRRRWTGYGNLPSQQHLWLNPVSIKTK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G25830.19e-31GATA family protein