PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY92294.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family NF-YA
Protein Properties Length: 254aa    MW: 28685.4 Da    PI: 8.9661
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY92294.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA85.95.9e-27125179358
   CBFB_NFYA   3 plYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                 p++VNaKQy++I++RR  Rak+e++++   k+rkpy+h SRh hA+rR+Rg gGrF
  TEY92294.1 125 PIFVNAKQYNAIMRRRRCRAKAESKNQE-MKTRKPYMHLSRHLHAVRRHRGVGGRF 179
                 9***********************9988.9*************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 254 aa     Download sequence    
MHTIFFKENE GIFQDPHEIP LWSVVGSPPP PKVLSLAGKN LQLGVAKESD EDRRVLAKED  60
STHFTVFPVQ DASMEHEGQF KIGFGQPLIC AQYPYNAEQS YGIYLAQIEG SRVMLPSNVA  120
IEGGPIFVNA KQYNAIMRRR RCRAKAESKN QEMKTRKPYM HLSRHLHAVR RHRGVGGRFL  180
SAKGSNTEEK NNQAKHEQPQ STESQMSEVL ESDGGHRSTK ANSGSEVTSY LHHFEFDLLQ  240
PSFPPYMASN YLKV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G05690.13e-27NF-YA family protein