PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY92460.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

MIKC_MADS

Protein Properties

Length: 245aa MW: 27761.6 Da PI: 8.6408

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY92460.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	86.6	1.4e-27	9	59	1	51
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krienk n+qvtfskRr+g+lKKA+E+SvLCda+v ++ifs++gkl ey++ TEY92460.1 9 KRIENKVNQQVTFSKRRTGLLKKAHEISVLCDADVGLMIFSTKGKLSEYAT 59 79***********************************************86 PP
2	K-box	85	1.6e-28	86	173	13	100
K-box 13 kaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 s++ el kLk ++e Lq+++ +l G++LesLs+ke q+Le+qLe slkk Rs+Kn+l+ e+i+ lqkkek++qe+n+ L++k++e TEY92460.1 86 SPGSWNVELGKLKTRLEVLQKNHSNLSGDNLESLSMKEVQNLEHQLEVSLKKLRSRKNHLMNESISMLQKKEKAMQEHNNLLSRKMKE 173 45689********************************************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 245 aa Download sequence
MVRGKVEVKR IENKVNQQVT FSKRRTGLLK KAHEISVLCD ADVGLMIFST KGKLSEYATD 60 SCMERILDRY ERSSSVDGQK APDLQSPGSW NVELGKLKTR LEVLQKNHSN LSGDNLESLS 120 MKEVQNLEHQ LEVSLKKLRS RKNHLMNESI SMLQKKEKAM QEHNNLLSRK MKEKAIESTP 180 PCEARNHSTN TLSLDLEQPL SSLNTSEENE GHVGQSEPCN NNGEMAAAAP WMLHHIQMQG 240 QNRQM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60910.1	5e-74	MIKC_MADS family protein